Welcome!
The OHSU Massively Parallel Sequencing Shared Resource (MPSSR) was founded in 2009 to provide high quality, cost efficient short read sequencing services to help investigators examine the genetic profiles that underlie disease predisposition and to explore the fundamental operations of biological systems. In addition to sequencing services, the MPSSR offers a variety of library construction services - including genome resequencing with sequence capture and transcriptome analysis. Contact us about your proposed work to see how we can assist you.
Funding for our original Illumina GAIIx sequencer was provided by a generous grant from the M.J. Murdock Charitable Trust. Funding for our upgrade to the HiSeq 2000 was provided by OHSU. Our HiSeq 2500 and NextSeq 500 were funded by the M.J. Murdock Charitable Trust.
The MPSSR receives support from the Knight Cancer Institute, the Portland Alcohol Research Center, and the OHSU Shared Resource Program.
Robert Searles, Ph.D
503.418.2736
| Hours | Location |
|
7:00 am -4:00 pm Monday - Friday |
Richard Jones Hall Director's Office-Room 5327A Staff Office-Room 5381 Laboratory-Room 5390 |
| Name | Role | Phone | Location | |
|---|---|---|---|---|
| Robert Searles Ph.D |
Director
|
503-418-2736
|
searlesr@ohsu.edu
|
RJH 5327A
|
| Rachel Henson |
Sequencer Operator
|
503-418-9378
|
hensonr@ohsu.edu
|
RJH 5381
|
| Chenwei Lin |
Informatics and Programming
|
503-418-9378
|
linche@ohsu.edu
|
RJH 5381
|
| Amy Carlos |
Laboratory Manager
|
503-418-9378
|
carlosa@ohsu.edu
|
RJH 5381
|
| Price list |
| ► LIbrary Preparation - Chromium Based non-RNA-Seq (1) | |||
| Name | Description | Price | |
|---|---|---|---|
| 10x Genomics scATAC non-IGL Library Completion |
scATAC library completion for samples initially prepared on a non-IGL Chromium system. |
Inquire | |
| ► Retired (6) | |||
| Name | Description | Price | |
| 10x Genomics Alignment per 10 million reads or read-pairs |
Alignment of 10x Genomics single cell data to a reference genome using Cellranger. |
Inquire | |
| Bionanalyzer - DNA Profile |
Profile of DNA samples on the Bioanalyzer |
Inquire | |
| Chromium Single Cell Day-One Fee |
Service charge for running on Chromium chip |
Inquire | |
| Library Preparation - RNA-seq - RNA Exome |
RNA-seq library preparation - capture based protocol for highly degraded RNA. Cost is per capture, with up to 4 samples per capture. |
Internal
$559.88
each
|
|
| Nimblegen Sequence Capture |
Pricing is for one capture set of up to 4 samples |
Inquire | |
| Sonication |
Cost per sample |
Inquire | |
| ► Sequencing - NextSeq 2000 (15) | |||
| Name | Description | Price | |
| NextSeq P1 100 Intro Price |
100 Cycle NextSeq 2000 P1 Flow Cell |
Inquire | |
| NextSeq P1 300 Intro Price |
300 Cycle NextSeq 2000 P1 Flow Cell |
Inquire | |
| NextSeq P1 600 Intro Price |
600 Cycle NextSeq 2000 P1 Flow Cell |
Inquire | |
| NextSeq P2 100 Intro Price |
100 Cycle NextSeq 2000 P2 Flow Cell |
Inquire | |
| NextSeq P2 200 Intro Price |
200 Cycle NextSeq 2000 P2 Flow Cell |
Inquire | |
| NextSeq P2 300 Intro Price |
300 Cycle NextSeq 2000 P2 Flow Cell |
Inquire | |
| NextSeq P2 600 Intro Price |
600 Cycle NextSeq 2000 P2 Flow Cell |
Inquire | |
| NextSeq P3 100 Intro Price |
100 Cycle NextSeq 2000 P3 Flow Cell |
Inquire | |
| NextSeq P3 200 Intro Price |
200 Cycle NextSeq 2000 P3 Flow Cell |
Inquire | |
| NextSeq P3 300 Intro Price |
300 Cycle NextSeq 2000 Flow Cell |
Inquire | |
| NextSeq P3 50 Intro Price |
50 Cycle NextSeq 2000 P3 Flow Cell |
Inquire | |
| NextSeq XLeap P4 100 Intro Price |
100 Cycle NextSeq 2000 P4 Flow Cell with XLeap Chemistry |
Inquire | |
| NextSeq XLeap P4 200 Intro Price |
200 Cycle NextSeq 2000 P4 Flow Cell with XLeap Chemistry |
Inquire | |
| NextSeq XLeap P4 300 Intro Price |
300 Cycle NextSeq 2000 P4 Flow Cell with XLeap Chemistry |
Inquire | |
| NextSeq XLeap P4 50 Intro Price |
50 Cycle NextSeq 2000 P4 Flow Cell with XLeap Chemistry |
Inquire | |
